Reference about TassDB:
Other References about tandem splice
sites:
- Hiller M, Huse K, Szafranski K, Rosenstiel P, Schreiber S, Backofen R, and Platzer M.
Phylogenetically widespread alternative splicing at unusual GYNGYN donors. Genome Biol. 7(7):R65, 2006
- Hiller M, Huse K, Szafranski K, Jahn N,
Hampe J, Schreiber S, Backofen R, and Platzer M. Single-Nucleotide
Polymorphisms in NAGNAG acceptors are highly predictive for variations
of alternative splicing. Am J Hum Genet. 78(2),
291-302, 2006
- Akerman
M, Mandel-Gutfreund Y. Alternative
splicing regulation at tandem 3' splice sites. Nucleic Acids Res, 34(1):23-31,
2006.
- Chern TM, van Nimwegen E, Kai C, Kawai J, Carninci P, Hayashizaki
Y, and Zavolan M. A
simple physical model predicts small exon length variations. PLoS Genet, 2(4):e45, 2006.
- Tadokoro K, Yamazaki-Inoue M, Tachibana M, Fujishiro
M, Nagao K, Toyoda M, Ozaki M, Ono M, Miki N, Miyashita T, and Yamada
M. Frequent
occurrence of protein isoforms with or without a single amino acid
residue by subtle alternative splicing: the case of Gln in DRPLA
affects subcellular localization of the products. J Hum Genet,
50(8):382-394, 2005
- Hiller M, Huse K, Szafranski K, Jahn N,
Hampe J, Schreiber S, Backofen R, and Platzer M.
Widespread occurrence of alternative splicing at NAGNAG acceptors
contributes to proteome plasticity. Nat Genet, 36(12),
1255-7, 2004.
- Sugnet CW, Kent WJ, Ares M, Jr., Haussler D. Transcriptome
and genome conservation of alternative splicing events in humans and
mice. Pac Symp Biocomput,66-77, 2004.
- Zavolan M, Kondo S, Schonbach C, Adachi J, Hume DA, Hayashizaki
Y, Gaasterland T. Impact
of alternative initiation, splicing, and termination on the diversity
of the mRNA transcripts encoded by the mouse transcriptome. Genome
Res, 1290-300, 2003.
References describing functional differences for the respective protein isoforms:
- Lorkovic ZJ, Lehner R, Forstner C, Barta A. Evolutionary
conservation of minor U12-type spliceosome between plants and humans.
RNA, 11(7):1095-1107, 2005.
- Tadokoro K, Yamazaki-Inoue M, Tachibana M, Fujishiro
M, Nagao K, Toyoda M, Ozaki M, Ono M, Miki N, Miyashita T, and Yamada
M. Frequent
occurrence of protein isoforms with or without a single amino acid
residue by subtle alternative splicing: the case of Gln in DRPLA
affects subcellular localization of the products. J Hum Genet,
50(8):382-394, 2005
-
Joyce-Brady M, Jean JC, Hughey RP.
gamma -glutamyltransferase and its isoform mediate an endoplasmic reticulum stress response.
J Biol Chem., 276(12):9468-77, 2001.
- Ray DW, Davis JR, White A, Clark AJ. Glucocorticoid
receptor structure and function in glucocorticoid-resistant small cell
lung carcinoma cells. Cancer Res,
56(14):3276-3280, 1996.
- Rivers C, Levy A, Hancock J, Lightman S, Norman M. Insertion
of an amino acid in the DNA-binding domain of the glucocorticoid
receptor as a result of alternative splicing. J Clin Endocrinol Metab,
84(11):4283-4286, 1999.
- Vogan KJ, Underhill DA, Gros P. An
alternative splicing event in the Pax-3 paired domain identifies the
linker region as a key determinant of paired domain DNA-binding activity.
Mol Cell Biol,
16(12):6677-6686, 1996.
- Condorelli G, Bueno R, Smith RJ. Two
alternatively spliced forms of the human insulin-like growth factor I
receptor have distinct biological activities and internalization
kinetics. J Biol Chem,
269(11):8510-8516, 1994.